Description:

Title: Data Engineer for text mining

Start Date: TBC

End Date: 31.12.2024 (multiple extensions expected)

Location: Basel

Background:

In the Research and Early Development organization (pRED), we make transformative medicines for patients in order to tackle some of the world's toughest unmet healthcare needs. At pRED, we are united by our mission to transform science into medicines. Together, we create a culture defined by curiosity, responsibility and humility, where our talented people are empowered and inspired to bring forward extraordinary life-changing innovation at speed. This position is located in Data Products & Platforms, a chapter within the Data & Analytics function, which pushes boundaries of drug discovery and development, enabling pRED to achieve its goals.

The mission of our team is to enable pRED & company scientists to access and work with scientific literature content from all major content providers and drive the FAIRification and democratization of pRED large-scale disease data.

We are looking for a highly motivated Data Curator/Engineer with a focus on OMICS data to join our team.

Tasks & Responsibilities:

Contributing to the development of a Vector Store

Establishing common terminologies to link literature and omics data and harmonization of study and biosample level metadata.

Data integration DDA Value Stream

Must Haves:

At least 5 years of experience in related fields (*)

University degree (Bachelor, Master, PhD)

Data engineering, data warehousing and database experience (*)

Knowledge of the FAIR principles (*)

Good understanding in the area of Text Analytics, TDM and LLMs (*)

Experience with biological Pathway and network content

Exposure to high performance computing environment

Python Scripting (*)

Biomedical background/education

Basic knowledge in scientific literature/published content/literature or/and other text based data

Basic knowledge on OMICS data

English fluent

We are not elegible to consider non-EU/EFTA citizens.

Job Title: Data Engineer For Text Mining

Location: Basel, Switzerland

Job Type: Contract

TEKsystems, an Allegis Group company. Allegis Group AG, Aeschengraben 20, CH-4051 Basel, Switzerland. Registration No. CHE-101.865.121. TEKsystems is a company within the Allegis Group network of companies (collectively referred to as "Allegis Group"). Aerotek, Aston Carter, EASi, TEKsystems, Stamford Consultants and The Stamford Group are Allegis Group brands. If you apply, your personal data will be processed as described in the Allegis Group Online Privacy Notice available at our website.

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